Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDRPLEGKVAFITGAARGLGRAHAVRLAADGANIIAVDICEQIASVPYPLSTADDLAATVELVEDAGGGIVARQGDVRDRASLSVALQAGLDEFGRLDIVVANAGI-----AMMQAGDDGWRDVIDVNLTGVFHTVQVAIPTLIEQGTGGSIVLISSAAGLVGIGSSDPGSLGYAAAKHGVVGLMRAYANHLAPQNIRVNSVHPCGVDTPMI-NNEFFQQWLTTADMDAP--------HNLGNALPVELVQPTDIANAVAWLASEEARYVTGVTLPVDAGFVNKR |
| 5EJ2 Chain:B ((37-308)) | -------GKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETADLVKDLDRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNVWQDMIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGR----KAYPNTGHYIAAKHGVIGLMRAFAVELGPHMIRVNAVLPTQVSTTMVMNDQTFR--LFRPDLENPGPDDFAPISQMMHTLPVPWVDASDISNAVLFLASDESRYVTGVSLPVDAGSLLK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5EJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190085 for 2256 contacts (-84.3/contact) +
2D Compatibility (PS) -27392 + (NN) -9545 + (LL) 1004
1D Compatibility (HY) -24800 + (ID) 6950
Total energy: -257768.0 ( -114.26 by residue)
QMean score : 0.592
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