Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSATGPGIVVIDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVIGIERATKILGLLTAAPKSYAATIRLGQTTSTEDAEGQVLQSVPAKHLTIEAIDAAMERLRGEIRQVPSSVSAIKVGGRRAYRLARQGRSVQLEARPIRIDRFELLAARRRDQLIDIDVEIDCSSGTYIRALARDLGDALGVGGHVTALRRTRVGRFELDQAR-SLDDLAERPALSLSLDEACLLMFARRDLTAAEASAAANGRSLPAVGIDGVYAACDADGRVIALLRDEGSRTRSVAVLRPATMHPG |
2RFK Chain:A ((43-251)) | ------GVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLAPKVSGVLPVALEKATRVVQALLPAGKEYVALMHLHGDVP----EDKIIQ--------------VMKEFEGEIIQRPPLRSAVK---RR--------------LRTRKVYYIEVLEIEGRDVLFRVGVE----AGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVD---YYYFWKEDGIEEYFRKAIQPMEKAV----EHLPKVWI-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RFK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97872 for 1509 contacts (-64.9/contact) +
2D Compatibility (PS) -21402 + (NN) -1886 + (LL) 5172
1D Compatibility (HY) -15600 + (ID) 4050
Total energy: -135638.0 ( -89.89 by residue)
QMean score : 0.434
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