Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTTIRIDDELYREVKAKAARSGRTVAAVLEDAVRRGLNPPKPQAAGRYRVQPSGKGGLRPGVDLSSNAALAEAMNDGVSVDAVR
2GPE Chain:A ((5-45))
-TMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLE-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2GPE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11129 for 192 contacts (-58.0/contact) +
2D Compatibility (PS) -4927 + (NN) -5847 + (LL) 1860
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -22093.0 ( -115.07 by residue)
QMean score : 0.792
(partial model without unconserved sides chains):
PDB file :
Tito_2GPE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GPE-query.scw
PDB file :
Tito_Scwrl_2GPE.pdb
: