Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGRPLHAFEVVATRHLAPHMVRVVLGGSG---FDTFVPSDFTDSYIKLVFVDDDVDVGRLPRPLTLDSFADLPTAKRPPVRTMTVRHVDAAAREIAVDIVLHGEHGV-AGPWA-AGAQRGQPIYLMGPGGAYAPDPAADWHLLAGDESAIPAIAAALEALPPD--AIGRAFIEVAGPDDEIG---LTA---PDAVEVNWVYRGGRADLVPEDRAGDHAPLIEAVTTTAWLPGQVHVFIHGEAQAVMHNLRPYVRNERGVDAKWASSISGYWRRGRTEEMFRKWKKELAEAEAGTH |
| 2PIA Chain:A ((6-231)) | ---DGFLRLKIASKEKIARDIWSFELTDPQGAPLPPFEA----GANLTVAVPNG-------------------------SRRTYSLCNDSQERNRYVIAVKRDS-NGRGGSISFIDDTSEGDAVEVSLPRNEFPLDKRAKSFILVAGGIGITPMLSMARQLRAEGLRSFRLYYLTRDPEGTAFFDELTSDEWRSDVKIHHDHGDPTK--AF---------DFWSVFEK--SKPAQHVYCCGPQA-LMDTVRDMTG---HWP-SGTVHFESFGATNTN------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PIA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132574 for 1631 contacts (-81.3/contact) +
2D Compatibility (PS) -23468 + (NN) -12057 + (LL) 4000
1D Compatibility (HY) -5600 + (ID) 1200
Total energy: -170899.0 ( -104.78 by residue)
QMean score : 0.304
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