Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDAVRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVS-KLVDIGAVAADYTMVAILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVV-GKVPDCINSGKYIEKVDG---LA-AAVNVHATPTVRVNGT-----------EYEWS-TPAALVAKIKEIVGDVPGIDSAAATATS |
| 3F4S Chain:A ((29-214)) | ------------------------------------------------------------------PNDKLLGDPKAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFPLDY------RGLKAAMLSHCYEK--QEDYFNFNKAVFN--SIDSWNYYNLSDLTLLQRIAALSNLKQDAFNQCINDKKIMDKIVNDKSLAINKLGITAVPIFFIKLNDDKSYIEHNKVKHGGYKELKYFTNVIDKLYGKAI----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F4S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106055 for 1243 contacts (-85.3/contact) +
2D Compatibility (PS) -17936 + (NN) -5236 + (LL) 4440
1D Compatibility (HY) -9200 + (ID) 1550
Total energy: -135537.0 ( -109.04 by residue)
QMean score : 0.469
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