Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFDRGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVELLWKLIEQSPGLEITANLQDRIITAATVVLPF-KIDDHSAWRLLEGLDDIALTLRKLDEIEAFEGACAYWKPRTLPAP
1V7L Chain:A ((2-149))
-----ITTGKVWKF-GDDISTDEITPGRYNLTKDPKELAKIAFIEVR--PDFARN---VRPGDVVVAGKNFGIGSSRESAALALKALGIAGVIAESFGRIFYRNAINIGIPLLLGKTE-------GLK--DGDLVTVNWETGEVRKGDEILMFEPLEDFLLEIVREGG-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1V7L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135683 for 1218 contacts (-111.4/contact) +
2D Compatibility (PS) -15276 + (NN) -3971 + (LL) 3712
1D Compatibility (HY) -5200 + (ID) 2150
Total energy: -158568.0 ( -130.19 by residue)
QMean score : 0.388
(partial model without unconserved sides chains):
PDB file :
Tito_1V7L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V7L-query.scw
PDB file :
Tito_Scwrl_1V7L.pdb
: