Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEVLVLVEHAEGALK-KVSAELITAARALGEP-AAVVVGVPGTAAPLV-DGLKAAGAAKIYVAESDLVDKYLITPAVDVLAGLAESSAPAGVLIAATADGKEIAGRLAARIGSGLLVDVVDVREGGVGVHSIFGGAFTVEAQANGDTP-VITVRAGAVEAEPAA--GAGEQVSVEVPAAAENAARITAREPAVAGDRPELTEATIVVAGGRGVGSAENFSVVEALADSLGAAVGASRAAVDSGYYPGQFQVGQTGKTVSPQLYIALGISGAIQHRAGMQTSKTIVAVNKDEEAPIFEIADYGVVGDLFKVAPQLTEAIKARKG |
1EFP Chain:A ((1-307)) | --AVLLLGEVTNGALNRDATAKAVAAVKALG-DVTVLCAGAS--AKAAAEEAAKIAGVAKVLVAEDALYGHRLAEPTAALIVGLAG--DYSHIAAPATTDAKNVMPRVAALLDVMVLSDVSAILDADTFERPIYAGNAIQVVKSKD-AKKVFTIRTASFDAAGEGGTAPVTETAAA---ADPGLSSWVADEVAES-DRPELTSARRVVSGGRGLGSKESFAIIEELADKLGAAVGASRAAVDSGYAPNDWQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQIADYGLVGDLFSVVPELTGKL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201025 for 2586 contacts (-77.7/contact) +
2D Compatibility (PS) -31871 + (NN) -8162 + (LL) 428
1D Compatibility (HY) -18000 + (ID) 6850
Total energy: -265480.0 ( -102.66 by residue)
QMean score : 0.525
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