Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANEPAIGAIDRLQRSSRDVTTLPAVISRWLSSVLPGGAAPEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLHRHFNWVRSWYDFAVEG---IGRSPLLER-TFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDF----QPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGLPEVMREDDVRATYQALTGVEL--GDLHWFYVYSGVMWACVFMRTGARRVHFGEIEKPDDVESLFYHAGLMKHLLGEEH |
| 3TDW Chain:A ((6-276)) | ------------------------LHYTTMIMTQFPDI--SIQSVE--SLGEGFRNYAILVN-----------GDWVFRFPKSQQ-----GADELNKEIQLLPLLVGCVKVNIPQYVYIGKR--SDGNPFVGYRKVQGQILGEDG-------M-AVLPDDAKDRLALQLAEFMNELSAFPVETAI--SAGVP---VTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYT---RYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPDYDYVYLLEDC-------------GE-LF---TRQVMAYRGEVDLDTHIRKVSLFVTFDQVSYLLE-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118597 for 1963 contacts (-60.4/contact) +
2D Compatibility (PS) -27753 + (NN) -5909 + (LL) 6916
1D Compatibility (HY) -13600 + (ID) 1900
Total energy: -160843.0 ( -81.94 by residue)
QMean score : 0.304
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