Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENARRLMEAVARDKAGHSAFTKSVDELREMAGGEE
3K6Q Chain:A ((3-50))
QTINATEIRNNFSYYIDTVVR-DKPIAVKRNRDVLLFFSEQIIKDLLQD------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3K6Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13278 for 259 contacts (-51.3/contact) +
2D Compatibility (PS) -5140 + (NN) -272 + (LL) 3084
1D Compatibility (HY) -4000 + (ID) 400
Total energy: -20006.0 ( -77.24 by residue)
QMean score : 0.391
(partial model without unconserved sides chains):
PDB file :
Tito_3K6Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K6Q-query.scw
PDB file :
Tito_Scwrl_3K6Q.pdb
: