Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRFWENVGKPNDTTDGRGTTSLAMTPISQTPGLLAEAMVDLGAIEHNVR--VLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLA-DVQVAVSSLRQLDELLHAVRRTGRTAT-VTVKVDTGLNRNG-VGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPV--PALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREAENR |
| 3E6E Chain:B ((13-370)) | ---------------------------------------IDTQAITENVQKECQRLPEGTA-LFAVVKANGYGHGAVESAKAAKKGGATGFCVALLDEAIELREAGVQDPILI-LSVVDLAYVPLLIQYDLSVTVATQEWLEAALQQLTPESNTPLRVHLKVDTGMGRIGFLTPEETK---QAVRFVQSHKEFLWEGIFTHFSTADEIDTSYFEKQAGRFKAVLA-VLEELPRY--VHVSNSATALWHPDVPGNMIRYGVAMYGLNPSGNKLAPSYALKPALRLTSELIHVKRLAAGEGIGYGETYVTEAEEWIGTVPIGYADGWLRHLQG-FTVLVNGKRCEIVGRVCMDQCMIRLAE---EVPVGPVVTLVGKDGNEENTLQMVAEKLETIHYEVACTFSQRIPREY------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E6E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213889 for 2907 contacts (-73.6/contact) +
2D Compatibility (PS) -38067 + (NN) -7840 + (LL) 3416
1D Compatibility (HY) -28400 + (ID) 6850
Total energy: -291630.0 ( -100.32 by residue)
QMean score : 0.315
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