Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRASGLLPRWEQTQRFIGEMRGT
4HMZ Chain:D ((4-185))
-----LSIEGAWSQEPVIHSDHRGRSHEWFRGESFRQAFGHDFPVAQVNVAVSHRGALRGIHYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDDATLVYLCSSGYAPAREHSVNPLDPDLGIAWP--DDIEPLLSDRDENAPTLATAERLGLLPTY-------------
General information:
TITO was launched using:
RESULT:
Template:
4HMZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103964 for 1433 contacts (-72.5/contact) +
2D Compatibility (PS) -19713 + (NN) -11362 + (LL) 1940
1D Compatibility (HY) -15200 + (ID) 4350
Total energy: -152649.0 ( -106.52 by residue)
QMean score : 0.751
(partial model without unconserved sides chains):
PDB file :
Tito_4HMZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HMZ-query.scw
PDB file :
Tito_Scwrl_4HMZ.pdb
: