Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTAPPVHDRAHHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEG-----TSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMEDVESVSLHG-PLK--SVVTADGQTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCATCDGF--FFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRASKIMLDRARNNDKIRFLTNHTVVAVDGD-TTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVREAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAERWLAEHAATGEADSTDALIGAQR |
3D8X Chain:B ((11-322)) | --------------NKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRASTIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKYL-------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3D8X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -220789 for 2621 contacts (-84.2/contact) +
2D Compatibility (PS) -32150 + (NN) -5965 + (LL) 1964
1D Compatibility (HY) -24000 + (ID) 7250
Total energy: -288190.0 ( -109.95 by residue)
QMean score : 0.538
|
|
|