Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRLKKTLHLSSLSLASLALSSAALAAAPVMLDQGKEWTESHRQDFYSRDQGSQVMPLPWLKALRQPDGTPFLADSLARYGYLPNPKAPAEGLPVGFTVAGTGARQMVGMTCSACHTRQIEVKGTAYRIDGGPAIVDFQAFLADLDRAVGPLTSDDAAFDAFAKPILGANPPPGARDALLAAVKEWYEPYHTLIERALPKDTWGPARLDAVSMIFNRLTGLDIGTAPPYLIPDNIKAADAPVRYPFLWNAARQNKTQWPGFAANGNDLLGLARNVGEVYG--VFAT-----F-HPQKSKFHLLGMDYLKIN---SAN-FHGLGKLEDLIKKIGPPKWPWA--------VDKHLARKGALIFARKTDEGGCVECHGIRIKDLVLWDTPLRDVGSDSRQHAILDGQVQTGVMEGARMPFGQPLKATDGAFDVLAVAVAGSILQHFVPILGEKHDAKAAAVKPESVMTDETRQLLTAFQKPVRTQADPYPYESRVLQGIWAAAPYLHNGSVPTLEELLKPAAERVESFPVGSAYDVDKVGLAAQQTQFGSYVLKTTGCEQRDSGNSRCGHEYGTSLSAEEKRALLEYLKVL
2VHD Chain:A ((76-299))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GPRNSPTVFNAVFNAAQFWDGRAKDLG-----EQAKGPIQNSVEMHSTPQLVEQTLGSIPEYVDAFRKAFPKAGKPVSFDNMALAIEAYEATLVTPDSPFDLYLKGDDKALDAQQKKGLKAFMD----SGCSACHNGINL--GG--QAYFPFGLVKKP--------DASVLPS-----------------------------------------GDKGRF-----------AVTK-----T-QSDEYVFRAAPLRNVALTAPYFHSGQVWELKDAVA--------IMGN-----------------------------AQ---------LGKQLAPDDVENIVAFLHSL


General information:
TITO was launched using:
RESULT:

Template: 2VHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27339 for 1546 contacts (-17.7/contact) +
2D Compatibility (PS) -21286 + (NN) -12844 + (LL) 21368
1D Compatibility (HY) -1200 + (ID) 1800
Total energy: -43101.0 ( -27.88 by residue)
QMean score : 0.171

(partial model without unconserved sides chains):
PDB file : Tito_2VHD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VHD-query.scw
PDB file : Tito_Scwrl_2VHD.pdb: