Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKQERSVPSYVEYPYEQAILYVHRNASANEMLESVQERLRALLGLLHALERIEVRTGLGVPIQRVAHILVTLGGDALTLLTAAHRATTS
1M45 Chain:B ((1-25))
--------------QISQAIKYLQNNIKGFIIRQRVNDE---------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1M45.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 241 for 95 contacts (2.5/contact) +
2D Compatibility (PS) -2786 + (NN) -2107 + (LL) 5712
1D Compatibility (HY) -1600 + (ID) 300
Total energy: -840.0 ( -8.84 by residue)
QMean score : 0.112
(partial model without unconserved sides chains):
PDB file :
Tito_1M45.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1M45-query.scw
PDB file :
Tito_Scwrl_1M45.pdb
: