Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKLSPIFSNITGVVRYQDLAYVASVSDEIQEQNIAHSYVTEWDCGTWCVAGEDDDMLPWEIVSATVVHEPVEQALFLGARG--QVFCMG-SGDIHEEQLPDGDDAIGGRGNMRGVACIDGVAYACGMDR-----QVYRRFD-ENDWRAIDTGARPPAGSEAVVGFEAIGGFGAREIYAVGWDG-------EIWQYD--GKRWQPRESPTN-LILTAICCAEDGSVYACGQAG----------TLLRGR--NDHWEIIAQDDVDEDLWSLAWFDGALYVSSAT-------AVYTLVG--GHLKEVDFGDEQPQRCFHLSAADGVLWSIAA-------KDIFSFDG--QQWTRID |
| 3II7 Chain:A ((12-278)) | ------------------------------------------------------------------------DYRIALFGGSQPQSCRYFNPKDYSWTD-IRCP----FEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT-P-----RDSLAA--CAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMV-EANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSP-MPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3II7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125175 for 1704 contacts (-73.5/contact) +
2D Compatibility (PS) -23915 + (NN) -6815 + (LL) 5648
1D Compatibility (HY) -8000 + (ID) 1400
Total energy: -159657.0 ( -93.70 by residue)
QMean score : 0.378
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