Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------MPTRVLRGLVAALPLFLAACSD---SAPSSEEIAR----LLAERGFDKP----ACASSTLFKTFPVTLSDS---FSGPGPAKGNAAVYDALVGVGLLRRDGD-------SYDLTPAGREDYKPESKAFCYSSGFDVSVRSVDPAKPDDYGPAVEKG----WLVTVEVKPREVKDWAK-NPEVLKQASLTTLQQITQPQVGQVSLVKPRGEE---GYKLVNT-----RFSPRQGFHFNQAW--- |
| 4LXU Chain:A ((1-273)) | GHMIKICIAGKNNIAVNSLQFILKNYFEADQIVVIPNKNDKGIDSWQKSLLKFALDNNIKIVTLDEIYNIEQIIFFSLEFDQIIKIENFKSDRLFNIHFSALPKYKGVFTSITPILNN----ELESGVTLHRIDNGIDTGNIIDQHCFPIDINDTARDLYFNYLKYGESIFKKNIQTIINNSYKDLKQTNINSSYFSRKDINLVHKINFKKTSFEIHNQIRAFIFQEYQLPIINNSKIIKSILANEFIGYNVFEEFENYFIISGIDGFKIIAQKLNK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4LXU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 20668 for 1358 contacts (15.2/contact) +
2D Compatibility (PS) -20629 + (NN) 1332 + (LL) 572
1D Compatibility (HY) -5200 + (ID) 1750
Total energy: -5007.0 ( -3.69 by residue)
QMean score : 0.007
|
|
|