Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLPANLGRLLPALCLGVLLSACSTFGQRDPLRIDLVGLEPLPGQGMEMRFMVKLRVQNPNDEPIEYNGIALDLDVNGQPLASGVSDQ--TGEVPRFGERVVSVPLTVSAFSAFRQAWGLSNNAPTQGMPYVVKGKLAGGLFGTVRFSEKGTLDFSGPAVGAPKTKGL
2Q3Z Chain:A ((584-660))
----------------------------LENPEIKIRI---LGEPKQKRKLVAEVSLQNPLPV--ALEGCTF--TVEGAGLTEEQKTVEIPDPVEAGEEVKVRMDLVPLHMGLHKLVVNFESDKLKAVKGFRNVI---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2Q3Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17748 for 412 contacts (-43.1/contact) +
2D Compatibility (PS) -8123 + (NN) -3305 + (LL) 3700
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -29326.0 ( -71.18 by residue)
QMean score : 0.351
(partial model without unconserved sides chains):
PDB file :
Tito_2Q3Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q3Z-query.scw
PDB file :
Tito_Scwrl_2Q3Z.pdb
: