Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALQVASAPHGSSEDSTSASLPANYPYHTRMRRNEYEKAKHDLQIELLKVQSWVKETGQRVVVLFEGRDAAGKGGTIKRFMEHLNPR-GA-RIVALEKPSSQ----EQGQ---------WY-------------FQRYIQHLPTAGEMVFFDRSWYNRAGVERVMGFCSPLQYLEFMRQAPELERMLTNSGILLFKYWFSVSREEQLRRFISRRDDPLKHWKLSPIDIKSLDKWDDYTAAKQAMFFHTDTADAPWTVIKSDDKKRAR---LNCIRHFLHSLDYPDKDRRIAHEPDPLLVGPASRVIEEDEKVYAEAAAAPGHANLDIPA |
| 3LD9 Chain:A ((19-220)) | ---------------------------------------------------------PGSMFITFEGIDGSGKTTQSHLLAEYLSEIYGVNNVVLTREPGGTLLNESVRNLLFKAQGLDSLSELLFFIAMRREHFVKIIKPSLMQKKIVICDRFIDSTIAYQGYGQGI-D---CSLIDQLNDLVI----DVYPDITFIIDVD---------------------------DMEFYYRVRDGFYDIAKK---NPHRCHVITDKSETYDIDDINFVHLEVIKVLQ----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LD9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70133 for 1142 contacts (-61.4/contact) +
2D Compatibility (PS) -17022 + (NN) -8794 + (LL) 9008
1D Compatibility (HY) -10400 + (ID) 1100
Total energy: -98441.0 ( -86.20 by residue)
QMean score : 0.410
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