Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSLQSPSDASARNDLVYGLDDRPSAPIALLAALQHLLAIIVPIVTPGLLICQALGVSPRDTNLIVSMSLVISGIATFVQCKRFGPFGAGLLIVQGTSFNFVGPLIAGGALMVKQGTPVESVMAAIFGVVIAGSFVEMG-ISRILPFVKRLITPLVTGIVVLMIGLTLIKVGLISMGGGFSAMSNGTFANGENLLLSGVVLGIIVVLNRIPVVWMRSCAIVIALAVGYALAGYLGRLDFTGMHQAELFQVPTPLHFGLDFSWPLFIPMLVIYLVTSLEAIGDVTATSKVSKQPVEGPLWMQRIKGGVLVNGANSFLAGIFNTFPSSVFAQNNGVIQLTGVASRYVGLWIAAMLVLLG---LFPSVAGVIQAVPEPVLGGAAMVMFGAVAASGINILAGIQLDR---------RALLIIAVSLALGLGVSQVPEFLAHMP-AALRNVLESGVATGGICALLLNWFLPESPVQKAGH |
| 3ZPJ Chain:A ((1-356)) | MTTLEEINLLVERGY--------------YEEALAKVYEI---------------------EDPIEQVQVLTKIVVTIYQ--------------HDGPMEWIPSIMEDAMYIAKKLR--DPANKAVAYSIIASTLAIMEYEEDAMDFFNRAIDEANEIESPIEKGMVLSTLAYHLAIAGYPDNALEIFNIAFDTIIGA------------ETSYTHKVDGILRIGDLLEKAGDT----LPSNEAMDFYKMAFDIFDKLHVNQRAAIVEKKIELAKTVYDVG------------------LPQIRAALLKGKNHYALAIIKKKYS--------------GVMRLIGELEVALWMKRVNNMEYLDVVDKAFECCESPRFTDVNVQHIARLLTELGNLRRALKFAKEIQNIHKRSEALKAIALELVRRKKFEEVKKIIESIPDPKIREEALNEIGTIE-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -346454 for 2718 contacts (-127.5/contact) +
2D Compatibility (PS) -35862 + (NN) -9524 + (LL) 7668
1D Compatibility (HY) -12800 + (ID) 2450
Total energy: -399422.0 ( -146.95 by residue)
QMean score : 0.332
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