Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMSPNGSLKFASQAVAKPYFVFALILFVGQILFGLIMGLQYVVGDFLF-PAIPFNVARMVH-TNLLIVWLLFGFM-GAAYYLVPEES-DCELYSPKLAWILFWVFAAAGVLTILGYLL---------VPYAGLARLTGNELWPTMGREFLEQPTISKAGIVIVALGFLFNVGMTVLRGR-------KTAISMVLMTGLIGLALLFLFSFYN--------------------PENLTRDKFYWWWVVHLWVEGVWELIMGAILAFVLVKITGVDREVIEKWLYVIIAMALISGIIGTGHHYFWIGVPGYWLWLGSVFSALEPLPFFAMVLFAFNTINRRRRRDYPNRAVALWAMGTTVMAFLGAGVWGFMHTLAPVNYYTHGTQLTAAHGHMAFYGAYAMIVMTIISYAMPRLRGIGEAMDNRSQVLEMWGFWLMTVAMVFITLFLSAAGVLQVWLQRMPADGAAMTFMATQDQLAIFYWLREGAGVVFLIGLVAYLLSFRRGKAAA |
2YEV Chain:A ((22-484)) | ---------VDHKKIGLMYTATAFFAFALAGVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFSA---------QSESGVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVY-VMLLPYLGILAEVASTF-ARKPLFGYRQMVWAQMGIVVLGTMVWAHHMFTVGESTLFQIAFAFFTALIAVPTGVKLFNIIGTLWGGK---LQMKTPLYWVLGFIFN-FLLGGITGVMLSMTPLDYQFHDSYFVVAHFHNVLMAGSGFGAFAGLYYWWPKMTG--R---MYDERLGRLHFWLFLVGYLLTFLPQYALGYL-----GMPRRYYT--YNADIAGWPELNLLSTIGAYILGLGGLVWIYTMWKSLRSG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YEV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -528339 for 3659 contacts (-144.4/contact) +
2D Compatibility (PS) -43597 + (NN) -17879 + (LL) 2012
1D Compatibility (HY) -25200 + (ID) 4000
Total energy: -617003.0 ( -168.63 by residue)
QMean score : 0.284
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