Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLRFALTPGEPAGIGPDLCLLLARSA---QPHPLIAIASRTLLQERAGQLGLAID-LKDVSPAAWPERPAKAGQLYVWDTPLAAPVRPGQLDRANAA-YVLETLTRAGQGCLDGHFAGMITAPVHK--GVINEAGIPFSGHTEFLADLTHTAQVVMMLATRGLRVALATTHLPLREVADAISDERLTRVARILHADLRDKFGIAHPRILVCGLNPHAGEGGHLGREEIEVIEPCLERLRGE--GLDLIGPLPADTLFTPKH----------LEHCDAVLAMYHDQGLPVLKYKGFGAAVN----VTLG--LPIIRTSVDHGTALDLAGSGRIDSGSLQVALETAYQMAASRC |
| 1VMI Chain:A ((26-325)) | -PARVVFPDAL----DQ-RVLKAAQYLHQQGLATPILVANPFELRQFALSHGVAMDGLQVIDPHG-NLA-MRE---EFAHR--WLARAGE-KTPPDALEKLTDPLMFAAAMVSAGKADVCIAGNLSSTANVLR-AGLRIIGLQPGCKTLS---SIFLMLPQYSGPALGFAD----CSVVPQPTAAQLADIALASAETWRAITGE-EPRVAMLS----FSSNGSARHPCVANVQQATEIVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIGYKIAQRLGGYRAVGPLIQGLAAPMHDLSRGC-SVQEIIELALVAAVPR--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182726 for 2314 contacts (-79.0/contact) +
2D Compatibility (PS) -29057 + (NN) -4798 + (LL) 1576
1D Compatibility (HY) -3200 + (ID) 2250
Total energy: -220455.0 ( -95.27 by residue)
QMean score : 0.227
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