Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRASFVLLALSCAAPLLSLAEPLRFAGD-DGCPYLCPG-TPQRPGYLVEALSQVLR---EPPHFDSLPWPRAVQMVRDGHRDGLVGAYG---L---DGLRVGSEPIGWVGLAFYTRHDSDWHYSGDASLLGQRLGLAQGYVNNPRFEAWRSQAGDDDLHLQVLGGERVLPRNLQKLLLGRIDVLLEDRDIIEHYLEHHPQLAGQIRRAGELPGRQPLHVGLSPHLPEVDARLAELDEGLRQLRREGTLKVLGERYRLSFE |
| 2YLN Chain:A ((54-279)) | ------------------NNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKETQWDSMMAGLKAGRFDVVANQVGLTSPERQATFDKS-EPYSWSGAVLVAHNDSN--IKSIADIKGVKTAQSLTSNYGEKAK----AAG-----AQLVP-VDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGVKIVWSAPADEKVGSGLIVNKG---NDEAVAKFSTAINELKADGTLKKLGEQFFGKDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YLN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98880 for 1749 contacts (-56.5/contact) +
2D Compatibility (PS) -23113 + (NN) -11029 + (LL) 2628
1D Compatibility (HY) -2000 + (ID) 2100
Total energy: -134494.0 ( -76.90 by residue)
QMean score : 0.356
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