Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPDTLRHARVIILGSGPAGYSAAVYAARANLKPLLITGMQA-----GGQLTTTTEVDNWPGDPHGLTGPALMQRMQEHAERFETEIVFDHIHAVDLAGKPFTL----RGDNGTYTCDALIVATGASARYLGLPSEQAFMGKGVSACATCDGF--FYRNREVAVIGGGNTAVEEALYLANIASRVTLVHRRETFRAEKILQDKLQARVAEGKIVLKLNAEVDEVLGDTMGVTGVRLK-TRDGGSEEIAVDGMFVAIGHTPNTSLFEGQLALKD-GYLVVNGGREGNATATNVPGVFAAGDVADHVYRQAITSAGAGCMAALDVERYLDSL |
3D8X Chain:B ((12-325)) | --------KVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRASTIMQKRAEKN---EKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPG----SSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKYLTSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D8X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231316 for 2587 contacts (-89.4/contact) +
2D Compatibility (PS) -32949 + (NN) -10369 + (LL) 900
1D Compatibility (HY) -24800 + (ID) 7550
Total energy: -306084.0 ( -118.32 by residue)
QMean score : 0.512
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