Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIACLDLEGVLVPE-IWIAFAEKTGIDA-----LKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIATLKPLEGAVEFVDWLRE-RFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQL---RQKDPKRQSV----IAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLKASSRSLSL
3P96 Chain:A ((185-393))
KRLIVFDVDSTLVQGEVIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLA--GLPATVIDEVAGQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIV-DGTLTGRVVGPIIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAFNAKPALREVADASLSHPYLDTVLFLLGVTRGEIEAA
General information:
TITO was launched using:
RESULT:
Template:
3P96.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130566 for 1645 contacts (-79.4/contact) +
2D Compatibility (PS) -20886 + (NN) -8893 + (LL) 72
1D Compatibility (HY) -4800 + (ID) 2200
Total energy: -167273.0 ( -101.69 by residue)
QMean score : 0.432
(partial model without unconserved sides chains):
PDB file :
Tito_3P96.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P96-query.scw
PDB file :
Tito_Scwrl_3P96.pdb
: