Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQMMQMYQQ-VGPAQFSAMIGQFAPYFASIAPQFVELRPGYAEVTFPKRREVLNHIGTVHAIALCNAAELAAGTMTDASIPAGHRWIPRGMTVEYLAKAT-GDVRAVADGSQIDWQAT-GNLVVPVVAYVDD-KPVFRAEITMYVSQA
1SC0 Chain:A ((2-137))
------LWKKTFTLENLNQL--CSNSAVSHLGIEISAFGEDWIEATMPVDHRTMQPFGVLHGGVSVALAETIGSLAGSLCLEEGKTVVGLDINANHLRPVRSGKVTARATPI----NLGRNIQVWQIDIRTEENKLCCVSRLTLSVINL
General information:
TITO was launched using:
RESULT:
Template:
1SC0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33918 for 942 contacts (-36.0/contact) +
2D Compatibility (PS) -13664 + (NN) -1903 + (LL) 1272
1D Compatibility (HY) 2400 + (ID) 350
Total energy: -46163.0 ( -49.01 by residue)
QMean score : 0.090
(partial model without unconserved sides chains):
PDB file :
Tito_1SC0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SC0-query.scw
PDB file :
Tito_Scwrl_1SC0.pdb
: