Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRCRNCGERPAS----EGHICMVCKRRSDIDPYKALIAMALLVYCGVSLAAYLKPHMPAPPPTAGSSVQPAEELAQRARQATLEQRGI
2JNY Chain:A ((11-40))
-LACPKDKGPLRYLESEQLLVNERLNLAYRIDDGIPVLLIDEATEWTPNNLE-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JNY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7744 for 131 contacts (-59.1/contact) +
2D Compatibility (PS) -2615 + (NN) -923 + (LL) 2312
1D Compatibility (HY) -400 + (ID) 100
Total energy: -9470.0 ( -72.29 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_2JNY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JNY-query.scw
PDB file :
Tito_Scwrl_2JNY.pdb
: