Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPDTSPDLPAMSPLAVYRQAVEQRGFAPDEAQRRAAEALERCFQALHEAHRHGAIQGVYLWGPVGRGKTWLMDHFYQCLRVPARRQHFHHFMQWVHQRQFELTGTADPLRALARELARDVR-----VLCFDELFVSDIGDAILLGSLLRIMFEEGVVLVATSNQP--PEQLYADGFNRERFLPAIEAIQRHMAVVAVDGGQDHRLHPGRAEQRYWVVEAGQASGFAELFARLSAGEAASTQPIELGHRPLAVHRHSESVLWCSYAQLCEAPLSALDFIGLCDRYRAILMDDLPCLSASQREGRIARGTEDGAQLVEAGDRELPQLSVHDDGVRRFIALVDECYDRKVPLYLEARVPLEALYTEGYLAFAFRRTLSRLREMQLARFGSDSAG |
| 3T15 Chain:A ((68-360)) | ----------------NLDNKLDGFYIAPAFMDKLVVHITK---NFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGIN---------PIMMSAGELESGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDNNQMVNATLMNIADNPTENARVPIIVTGNDFSTAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVP-----------------------AEDVVKIVDN-----------------------------------------FPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFE------------------------------------QPKMTIEKLLEYGNMLVQEQENVKRVQLADK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T15.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109522 for 1792 contacts (-61.1/contact) +
2D Compatibility (PS) -27856 + (NN) -10155 + (LL) 9384
1D Compatibility (HY) 400 + (ID) 1400
Total energy: -139149.0 ( -77.65 by residue)
QMean score : 0.214
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