Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTYFDIPHRLVGKALYESYYDHFGQMDILSDGSLYLIYRRATEHVGGSDGR-VVFSKLEGGIWSAPTIVAQAGGQDFRDVAGGTMPSGRIVAASTVYE-TGEVKVYVSDDSGVTWVHKFTLARGGADYN-FAHGKSFQVGARYVIPLYAATGVNYELKWLESSDGGETWGEGSTIYSGNTPYNETSYLPVGDGVILAVARVGSGAGGALRQFISLDDGGTWTDQGNVTAQNGD------STDILVAPSLSYIYSEGGTPHVVLLYT--NR---TTHFCYYRTILLAKAVAGSSGWTERVPVYSAPAASGYTSQVVLGGRR-ILGNLFRETSSTTSGAYQFEVYLGGVPDFESDWFSVSSNSLYTLSHGLQRSPRRVVVEFARSSSPSTWNIVMPSYFNDGGHKGSGAQVEVGSLNIRLGTGAAVWGTGYFGGIDNSATTRFATGYYRVRAWI |
| 3H6J Chain:A ((1-438)) | MNTYFDIPHRLVGKALYESYYDHFGQMDILSDGSLYLIYRRATEHVGGSD-GRVVFSKLEGGIWSAPTIVAQAGGQDFRDVAGGTMPSGRIVA-ASTVYETGEVKVYVSDDSGVTWVHKFTLARGGA-DYNFAHGKSFQVGARYVIPLYAATGVNYELKWLESSDGGETWGEGSTIYSGNTPYNETSYLPVGDGVILAVARVGSGAGGALRQFISLDDGGTWTDQGNVTAQNGDSTDILVAPSLSYIYSE------GGTPHVVLLYTNRTTHFCYY-RTILLAR-AVAG--S-SGWTERVPAYSAPAASGYTSQVVLGGRRILGNLFRETSSTT-SGAYQFEVYLGGVPDFESDWFSVSSNSLYTLSHGLQRSPRRVVVEFARSSSPSTWNIVMPSYFNDGGHKGSGAQVEVGSLNIRLGTGAAVWGTGYFGGIDNSATTRLATGYYRVRAWI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H6J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206318 for 3461 contacts (-59.6/contact) +
2D Compatibility (PS) -47028 + (NN) -30569 + (LL) 912
1D Compatibility (HY) -48400 + (ID) 18900
Total energy: -350303.0 ( -101.21 by residue)
QMean score : 0.510
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