Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLLTELLDELRHPAVRDLAWTLLAPPLLRRTPEPQRHPLAASRW-----RQEPERLAAWLREQERQPQHLAAWLAQWPRQRLGLYYEHLWQFALEQAPDVRLIAANLPVRDGGHTLGELDLLLRDDDGIHHLELAIKLYLGPQSGPGDWLGPGGQDRLSRKLEHLCRHQL-PLAATREGRQVLAAHGAESAVSALWLSGYLFHPWPGPGSLPADIEPRHLRGRWLRQRDWPAYLASLAGPQTGQHWLHLSREHWLAPAMRRQDPLDPPRDGACWNIAFADEARPQMLVRVVPR---DGYWVEAERLFLASDDWPPGLSLWGSARQAADA |
1TRE Chain:A ((3-257)) | -----------------------------------MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAP-----PEMYIDMAKREAE--GSHIMLGAQNVNLNLSGAFTGETSAAMLKDIGAQ------YIIIGHSERRTYH--KESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIG-------------------TGKSATPAQAQAVHKFIRDHIAKV-DANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVG-----GASLKADAFAVIVKAAEAAKQA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TRE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57283 for 2074 contacts (-27.6/contact) +
2D Compatibility (PS) -26866 + (NN) -15425 + (LL) 6200
1D Compatibility (HY) 0 + (ID) 2150
Total energy: -95524.0 ( -46.06 by residue)
QMean score : 0.218
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