Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYNILQLRHHQAIIALKDKVAREKSPHKYEVDLTYITSRGNWYLKSWKGDPRKSFGVATNIGVHFYDMLHFIFGKLQRNVVHFTSEYKAAGYLEYEQARVRWFLSVDANDLPESVKGK-KPTYRSITVNGEEMEFSEGFTDLHTTSYEEILAGRGYGIDDARHCVETVNTIRSAVIVPASDNEGHPFVAALAR |
3O9Z Chain:B ((3-312)) | MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDL-RDRGEGVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVYTVLQLRVHPSLLALKERLGQEKGAK--DVVLTYVTGRGKWYGKSWKVDEAKSGGLATNIGIHFFDLLAWLFGRALHVEVHARTPTVNAGYLELEGARVRWFLSIDPSFVPEPLRRQGKRTYRSIAVDGEEVEFSEGFTDLHTEVYRKTLAGEGFGLDEAAEAIRVAALLRTLPLSQPSPENRHPFLG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222497 for 2633 contacts (-84.5/contact) +
2D Compatibility (PS) -33025 + (NN) -11255 + (LL) 784
1D Compatibility (HY) -25600 + (ID) 7700
Total energy: -299293.0 ( -113.67 by residue)
QMean score : 0.491
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