Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRNVRAYQDRGLLPPPER--RGRVGVYFDSHLKRLRLISQLLERGYSSANIKELLEAWEQGRDLDHVLGLDQAIIGEWNLETPGSIGFDELQAIFGDELNDRVIDKAQALGLLLFDGERMKIPSPRLFQAGLELYRSGIPLEALLDQLGELRSDTEHLAAGIVRLIVTHLVDGRGTDLLPGAPDLQELAKVFLRLRPLAEHVVQVELARGLKLSANEMLGERVGEMLRKLEKPS |
1R8E Chain:A ((19-76)) | IKALRYYDKIDLFKPAYVDPDTSYRYYTDSQLIHLDLIKSLKYIGTPLEEMKKAQDLE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R8E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19963 for 294 contacts (-67.9/contact) +
2D Compatibility (PS) -6455 + (NN) -6361 + (LL) 12328
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -24351.0 ( -82.83 by residue)
QMean score : 0.720
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