Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNLYTERVLSVHHWNDTLFSFKTTRNPGLRFKTGQFVMIGL-EVDGRPLMRAYSIASPNYEEHLEFFSIKVPDGPLTSRLQHLKEGDELMVSRKPTGTLVHDDLLPGKHLYLLSTGTGMAPFLSVIQDPETYERYEKVILVHGVRWVSELAYADFITKVLPEHEYFGDQVKEKLIYYPLVTREPFRNQGRQTDLMRSGKLFEDIGLPPMNPQDDRAMICGSPSMLEETSAVLDSFGLKISPRMGEPGDYLIERAFVEK
4K1X Chain:B ((3-250))
-----AQTVTSVRHWTDTLFSFRVTRPQTLRFRSGEFVMIGLLDDNGKPIMRAYSIASPAWDEELEFYSIKVPDGPLTSRLQHIKVGEQIILRPKPVGTLVIDALLPGKRLWFLATGTGIAPFASLMREPEAYEKFDEVIMMHACRTVAELEYGRQLVEALQEDPLIGELVEGKLKYYPTTTREEFHHMGRITDNLASGKVFEDLGIAPMNPETDRAMVCGSLAFNVDVMKVLESYGLREGAN-SEPREFVVEK-----
General information:
TITO was launched using:
RESULT:
Template:
4K1X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147387 for 2082 contacts (-70.8/contact) +
2D Compatibility (PS) -26588 + (NN) -11488 + (LL) 1212
1D Compatibility (HY) -26000 + (ID) 6600
Total energy: -216851.0 ( -104.16 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_4K1X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K1X-query.scw
PDB file :
Tito_Scwrl_4K1X.pdb
: