Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------MKTSHLIRIA-LPGALAAALLASQVSQAADLVPPPGYYAAVGERKGSAGSCPAVPPPYTGSLVFTS--KYEGSDSARATLNVKAEKTFRSQI-------KDITDMERGATKLVTQYMRSGR------------------DGDLACALNWMSAWARAGALQSDD-------FNHTGKSMRKWALGSLSGAYMRLKFSSSRPLAAH--AEQSREIEDWFARLGTQVV-RDWSGLPLKKINNHSYWAAWSVMSTAVVTNRRDLFDWAVSEFKVAANQVDEQGF---------------LPNELKRRQRALAYHNYALP-----------------------------PLAMIAAFAQVNGVDLRQENHGALQRLAERVMKGVDDEETFEEKTGEDQDMTDLKVDNKYAWLEPYCALYRCEPKMLEAKKDREPFNSFRLGGEVTRVFSREGGS |
| 1UC2 Chain:A ((2-481)) | VVPLKRIDKIRWEIPKFDKRMRVPGRVYADEVLLEKMKNDRTLEQATNVAMLPGIYKYSIVMPDGHQGYGF--PIGGVAAFDVKEGVISPGGIGYDINCGVRLIRTNLTEKEVRPRIKQLVDTLFKNVPSGVGSQGRIKLHWTQIDDVLVDGAKWAVDNGYGWERDLERLEEGGRMEGADPEAVSQRAKQRGAPQLGSLGSGNHFLEVQVVDKIFDPEVAKAYGLFEGQVVVMVHTGSRGLGHQVASDYLRIMERAIRKYRIPWPDRELVSVPFQSEEGQRYFSAMKAAANFAWANRQMITHWVRESFQEVFKQDPEGDLGMDIVYDVAHNIGKVEEHEVDGKRVKVIVHRKGATRAFPPGHEAVPRLYRDVGQPVLIPGSMGTASYILAGTEGAMKETFGSTCHGAGRVLSRKAATRQYRGDRIRQELLNRG--IYVRAASMRVVAEEAPGAYKNVDNVVKVVSEA---GIAKLVARMRPIGVAKG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 40916 for 3043 contacts (13.4/contact) +
2D Compatibility (PS) -37725 + (NN) -10577 + (LL) 80
1D Compatibility (HY) -800 + (ID) 2450
Total energy: -10556.0 ( -3.47 by residue)
QMean score : 0.223
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