Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------------------------------------------MNILVRP-SQTPKGQCWQVCLDQQAVNFRSESEARRFVDRLEARLRAPHVLPELKQRTA------------------------------------------------------------------------------------------------------------------------ |
| 3GN6 Chain:A ((22-321)) | FNPWTDAALDTIVNQALTLYAEMRVVPAHHDAFLAAIDTVSAKLRVLPGFLSLALKQMSGDSTMVKNYPETYKGVLATAYLDGVAAGTQPYFYNLFVRFADGRAARAAGFEALFETHIHPLLHAMADGPELLAYRAVL--QSVVAGDRHAIYRGAEEIRSFLRRPVELPERETVTVENHVMVPEDKHAAWEPQVAILLQVAQDTFEPQDEPSGVGLPGARDNRYYRKALSTEILRNAHADGGLRAYIMHGVWESVWDHENSHLDPRFLAAAGPVGAAAVVGPVEPFYLTRRLVVAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3608 for 216 contacts (16.7/contact) +
2D Compatibility (PS) -5837 + (NN) -1559 + (LL) 44
1D Compatibility (HY) -800 + (ID) 650
Total energy: -5194.0 ( -24.05 by residue)
QMean score : 0.391
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