Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------------------------------------------------------------------------------MSRFMALALCFVLPT-----AAHAASLKDFELSKMLEKVAKESSVGTPRAINEDILDQGYTVEGNQLINHLSVRASHAERMRSNPDSVRSQLGDSVCSNTGYRQLLARGAILTYSFTEYKTNQPVATERFDAGSCRIQGKK--------------------------- |
3WZM Chain:A ((15-278)) | MRTRSTISTPNGITWYYEQEGTGPDVVLVPDGLGECQMFDSSVSQIAAQGFRVTTFDMPGMSRSAKAPPETYTEVTAQKLASYVISVLDALDIKHATVWGCASGASTVVALLLGYPDRIRNAMCHELPTKLLDHLSNTAVLEDEEISKILANVMLNDVSGGSEAWQA---------MGDEV--HARLHKNYPVWARGYPRTIPPS-----APVKDLEAL--RGKPLDWTVGAATPTESFFDNIVTATKAGVNIGLLPGMHFPYVSHPDVFAKYVVETTQKHL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WZM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7611 for 722 contacts (-10.5/contact) +
2D Compatibility (PS) -12657 + (NN) -4524 + (LL) 1048
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -28944.0 ( -40.09 by residue)
QMean score : 0.326
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