Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVILLGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERITEADCAKGFLFDGFPRTIPQAEALKDAGVTIDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEELIQREDDKEETVRHRLSVYHSQTKPLVDFYQKLSAAEGTPKYHSIAGVGSVEQITAKVLSALS
4X8L Chain:B ((1-213))
MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAALIGYYSK-EAEAGNTKYAKVDGTKPVAEVRADLEKIL-
General information:
TITO was launched using:
RESULT:
Template:
4X8L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80686 for 1684 contacts (-47.9/contact) +
2D Compatibility (PS) -23440 + (NN) -13183 + (LL) 148
1D Compatibility (HY) -21600 + (ID) 6700
Total energy: -145461.0 ( -86.38 by residue)
QMean score : 0.570
(partial model without unconserved sides chains):
PDB file :
Tito_4X8L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4X8L-query.scw
PDB file :
Tito_Scwrl_4X8L.pdb
: