Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKVSTLDLLFVAIMGVSPAAFAADLIDVSKLPSKAAQGAPGPVTLQAAVGAGGADELKAIRSTTLPNGKQVTRYEQFHNGVRVVGEAITEVKGPGKSVAAQRSGHFVANIAADLPGSTTAAVSAEQVLAQAKSLKAQGRKTENDKVELVIRLGENNIAQLVYNVSYLIPGEGLSRPHFVIDAKTGEVLDQWEGLAHAEAGGPGGNQKIGKYTYGSDYGPLIVNDRCEMDDGNVITVDMNSSTDDSKTTPFRFACPTNTYKQVNGAYSPLNDAHFFGGVVFKLYRDWFGTSPLTHK-----LYMKVHYGRSVENAYWDGTAMLFGDG-ATMFYPLVS-LDVAAHEVSHGFTEQNSGLIYRGQSGGMNEAFSDMAGEAAEFYMRGKNDFLIGYDIKK---GSGALRYMDQPSRDGRSIDNASQYYNGID----VHHSSGVYNRAFYLLANS--------PGWDTRKAFEVFVDANRYYWTATSNYNSGACGVIRSAQN----RNYSAADVTRAFSTVGVTCPSAL
4TLI Chain:A ((68-315))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------APAVDAHYYAGVTYDYYKNVH--NRLSYDGNNAAIRSSVHYSQGYNNAFWNGSEMVYGDGDGQTFIPLSGGIDVVAHELTHAVTDYTAGLIYQNESGAINEAISDIFGTLVEFYANKNPDWEIGEDVYTPGISGDSLRSMSDPAKYGDP-DHYSKRYTGTQDNGGVHINSGIINKAAYLISQGGTHYGVSVVGIGRDKLGKIFYRALTQYLTPTSNFSQLRAAAVQSATDLYGSTSQEVASVKQAFDAVGV------


General information:
TITO was launched using:
RESULT:

Template: 4TLI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90093 for 1903 contacts (-47.3/contact) +
2D Compatibility (PS) -23045 + (NN) 34 + (LL) 14880
1D Compatibility (HY) -14800 + (ID) 4150
Total energy: -117174.0 ( -61.57 by residue)
QMean score : 0.572

(partial model without unconserved sides chains):
PDB file : Tito_4TLI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TLI-query.scw
PDB file : Tito_Scwrl_4TLI.pdb: