Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRLLVLFCCLWLLPGVASAAPSVGEIRVVSETWTRYTQED----GRGVAWDLLRAVYEPAGVRLRIAN-EPYTRAVGLVLRGEADAWV-GAYRGEIDE--ALYPRWPYDVDPIAVLSLKDNP--PPPL---EGLSRFRLSWMRGYAFARYFPT----LTPHSELQRRTSALPMLLNHRVDYFIDSRPELEEMLAGAGALAAEYRI-TDVTRLP---LYLGFSDSPRGRELLALFDRRMRQLHASGELERIFARWNWPYAPLKAILPPKE |
2Q88 Chain:A ((8-244)) | ------------------ELKEQGFARIAIANEPPFTAVGADGKVSGAAPDVAREIFKRLGVADVVASISEYGAMIPGLQAGRHDAITAGLFMKPERCAAVAYSQ-PILCDAEAFALKKGNPLGLKSYKDIADNPDAKIGAPGGGTEEKLALEAGVPRDRVIVVPDGQSGLKMLQDGRIDVYSLPVLSINDLVSKAN--DPNVEVLAPVEGAPVYCDGAAFRKG--DEALRDAFDVELAKLKESGEFAKIIEPYGFSAKA--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132858 for 1778 contacts (-74.7/contact) +
2D Compatibility (PS) -23422 + (NN) -10774 + (LL) 3040
1D Compatibility (HY) -3600 + (ID) 2050
Total energy: -169664.0 ( -95.42 by residue)
QMean score : 0.348
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