Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKSWLTASLLALTVASPFAAADIQGHKAGDFIIRGGFATVDPDDSSSDIKLDGAKQRGTKATVDSDTQLGLTFTYMFADKWGVELVAATPFNHQVDVKGLGPGLDGKLADIKQLPPTLLLQYYPMGGTNSAFQPYGGLGVNYTTFFDEDLASNRKAQGFSSMKLQDSWGLAGELGFDYMLNEHALFNMAVWYMDIDTKASINGPSALGVNKTKVDVDVDPWVYMIGFGYKF |
| 1P4T Chain:A ((3-155)) | ----------------------------ASGFYVQADAAHAKASSSLG---------------SAKGFSPRISAGYRIND-LRFAVDYTRY---KNYK--------APSTDFKLYSIGASAIYDFDTQ--SPVKPYLGARLSLNRASVDLGG--------SDSFSQTSIGLGVLTGVSYAVTPNVDLDAGYRYNYIGKVN--------------TVKNVRSGELSAGVRVKF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11499 for 1154 contacts (-10.0/contact) +
2D Compatibility (PS) -15754 + (NN) 2573 + (LL) 3464
1D Compatibility (HY) 1200 + (ID) 1300
Total energy: -21316.0 ( -18.47 by residue)
QMean score : 0.004
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