Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHRSTGIGVSRWLGGLLGVALALPALALPQGCIELLAQAPRVDVVQGQQRDLRLAVPIERLAIGDPKIA-----DVQLLDRRGFLVTGKEQGSTSLLIWTGCSPEPLRSLVEVEGRGSVDTRGAPAFTVGAAEELPNQ-------VQTDIRFVEVSRSKLKQAST-------SFVRRGGNLWVLGAPGSLGDIKVNADGSGLGGTFGTGSSGFNLIFGGGKWLSFMNALEGSGFAYT------LARPSLVAMSGQSASFLAGGEFPIPVPNGTNDNVTIEYKE----FGIRLTL-TPTVMNNRRIALKVAPEVSELDYSAGIQSGGVAVPALRVRRTDTSVMLADGESFVISGLTSSNSVSNVDKFPWLGDIPILGAFFRSTKLDKDDRELLMIVTPHLVQPLAADAQLPDLPGEGLRHYDPGFSRLYFLERGEYDGQQNDTGLSD----------- |
| 4R2F Chain:A ((38-431)) | --GAIKFWDMPWATPAYNDAAKKIAEGFSGA-------NSKATYQIIQWNNFYQTFSSAIASKTGPAVSTGGGFQAFQFEEQGQIAYA------------------DKVIEKLKSNGQFDD-----FLPGVVEPFKTSKGYVAVPWQLDIRPLWYRKSLFEKAGVGVPTDWASLLEAGKKLKGVGAVG-----------------FATGSGAGNNI---GNHLMIMMMLNNGGGVFTKDGELDVLNDRNVEAVEFLLELVSNGVIDPAAVSYTTDNLNAQWKDSKAAYGM-LTLGVPERVGDTSGDIVVASPIA----GPHGDKAALIFPNNIMMYTNTPSQEA-SEEFVVYYLGK---LKELWQQKLMNALPVFKSITEMPEFTADPNNVKIVNEYVPIAKTFA-SQGTALS-ANLAALDGGQALNQFTQTVLTGKTDAKSALTAFDTGLKSVLKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59872 for 2941 contacts (-20.4/contact) +
2D Compatibility (PS) -37463 + (NN) -17401 + (LL) 1448
1D Compatibility (HY) -8000 + (ID) 3300
Total energy: -124588.0 ( -42.36 by residue)
QMean score : 0.188
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