Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRG----------------KG-LKSLV-KAPLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAVAG---TAN---RSLAPI-----------ARRVCEAFPDTFPA-----SDKRLTTGNPVRGELFLDAHARAPLTGRRVNLLVLGGSLGA-EPLNKLLPEALAQVPLEIRPAIRHQAGRQH-AEITAERYRTVAVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKST--GAAELAAQLSEVLMHPETLRSMADQARSLAKPEATRTVVDACLEVARG |
| 3TSA Chain:A ((1-386)) | -HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPE--LQATAHGAGLTTAGI-------LRFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCAL--IGRVLGGLLDLPVVLHRWGVDPTAGPFSDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQASDAPQGAPVQYVPYNGSGAFP---AWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAATEL-PGVEAV-IAVPPEHRALLTDL----PDNARIAESVP-LNLFLRTCELVICAGGSGTAFTATRLGIPQLVLPQ----YFDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEITAMPHPAALVRTLENT--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178035 for 2873 contacts (-62.0/contact) +
2D Compatibility (PS) -35382 + (NN) -16370 + (LL) 1412
1D Compatibility (HY) -11200 + (ID) 3050
Total energy: -242625.0 ( -84.45 by residue)
QMean score : 0.487
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