Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQSSQLLPLGSLLLSFATPLAQADALHDQASALFKPIPEQVTELRGQPISEQQRELGKKLFFDPRLSRSHVLSCNTCHNVGTGGADNVPTSVGHGWQKGPRNSPTVFNAVFNAAQFWDGRAKDLGEQAKGPIQNSVEMHSTPQLVEQTLGSIPEYVDAFRKAFPKAGKPVSFDNMALAIEAYEATLVTPDSPFDLYLKGDDKALDAQQKKGLKAFMDSGCSACHNGINLGGQAYFPFGLVKKPDASVLPSGDKGRFAVTKTQSDEYVFRAAPLRNVALTAPYFHSGQVWELKDAVAIMGNAQLGKQLAPDDVENIVAFLHSLSGKQPRVEYPLLPASTETTPRPAE |
1ZZH Chain:B ((4-324)) | ------------------------ALREEAKGLFEVIPMQAPQ---NTVTRDKIDLGAMLFFDPRMSKSGVFSCQSCHNVGLGGVDGLETSIGHGWQKGPRNAPTALNAVFNVAQFWDGRAPDLAAQA---------MNNTPENLVATVQSMPGYVEAFAKAFPGQKDPISFDNFALAVEAFEATLITPNSKFDQWLMGADGAMSADEKAGLKLFIDTGCAACHNGINIGGNGYYPFGVVEKPGAEVLP--DKGRFAVTATADDEYVFRAGPLRNIALTAPYFHSGKVWDLREAVSVMANSQLGATLDDTQVDQITAFLGTLTGEQPEVVHPILPVRSAQTPRP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZZH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78718 for 2467 contacts (-31.9/contact) +
2D Compatibility (PS) -33070 + (NN) -24825 + (LL) 2192
1D Compatibility (HY) -31200 + (ID) 9200
Total energy: -174821.0 ( -70.86 by residue)
QMean score : 0.497
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