Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDEQPLSRPGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQ--R---LA-YLEPECRVAEMLDHAGLERALR--GLDGVIFSAGYYPSR--PRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQGL---------------PGHEGLFYDSLPSGKSSYVLCKWALDEQAREQA-RNGLPVVIGIPGMVLGELDIGP----TTGRVITAIG---NG---EMTHYVAG--QRNVIDAAEAGRGLLMALERG--RIGERYLLTGH---NLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFSTTALDDTLLRAIDWFRDNGYFNA |
| 1ORR Chain:A ((2-339)) | ------------AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQ----LDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFT-NLPV------------------R--E-----SDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSI----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ORR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163205 for 2548 contacts (-64.1/contact) +
2D Compatibility (PS) -32180 + (NN) -9765 + (LL) 3408
1D Compatibility (HY) -7600 + (ID) 2650
Total energy: -211992.0 ( -83.20 by residue)
QMean score : 0.459
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