Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNGLPMNLIWFRCDLRTTDNSAL-LAAADGRPCLALYLLSPAQWREH-----DDAPCKVDFWLRNLGELQRQLAALNIPLLVRDCGHWRQAPE-VIGRLCRELGVGAVHVNQEYGVNEERRDQAVGQRLREQGVAFHSHLDQLFFAPGSVLTRTGGYFQVFSQFRKVCHERLYQALPGVRPRPQ--PQPPHALA-SDPLPDAVPAFPRPADSLRRLWPAGEEVAQERLRDF--ADQHLADYHERRD-FPALPGTSQLSPYLAAGVLSPRQCLDAALVANRGEFSGGQQGAATW-INELLWREFYKHILVGYPRVSRHRPFREETEALRWRQAPAELEAWQQGRTGIPIIDAAMRQLLATGWMHNRLRMVVAMFLSKNLLIDWREGERWFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRLFNPLSQSERFDPRGEFIRHWLPELAGLERKAIHDPSSL--------GLFAGVDYPRPMVDLKASRERALAAFRNLPPRDGRA |
1NP7 Chain:B ((6-477)) | ----PTVLVWFRNDLRLHDHEPLHRALKSGLAITAVYCYDPRQFAQTHQGFAKTGPWRSNFLQQSVQNLAESLQKVGNKLLVTTG-----LPEQVIPQIAKQINAKTIYYHREVTQEELDVERNLVKQLTILGIEAKGYWGSTLCHPEDLPFSIQDLPDLFTKFRKDIEKKKISIRPCFFAPSQLLPSPNIKLELTAPPPEFFPQINFDHRSVLAF-QGGETAGLARLQDYFWHGDRLKDYKETRNGMVGADYSSKFSPWLALGCLSPRFIYQEV---KRYEQERVSNDSTHWLIFELLWRDFFRFVAQKYGNKLFNRG-GLLNKNFPWQEDQVRFELWRSGQTGYPLVDANMRELNLTGFMSNRGRQNVASFLCKNLGIDWRWGAEWFESCLIDYDVCSNWGNWNYTAGIGNDARD-FRYFNIPKQSQQYDPQGTYLRHWLPELKNLPGDKIHQPWLLSATEQKQWGVQLGVDYPRPCVNFHQSVE---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NP7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161031 for 3798 contacts (-42.4/contact) +
2D Compatibility (PS) -48155 + (NN) -21794 + (LL) 2124
1D Compatibility (HY) -30400 + (ID) 7600
Total energy: -266856.0 ( -70.26 by residue)
QMean score : 0.455
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