Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQRVYVALGSNLAEPREQIQAALDAFERLPETRLVAVSPLYISDPLGPADQPRFVNGVAALDTNLAPLDLLDALQAIELEQGRVRDL-RWGPRTLDLDILLFGEQLLDLPRLKVPHYHMQARAFVLYPLADLAPDLRLPDGRHLPELLAACPFEGIERLPGA
3HSG Chain:A ((4-157))
-----YIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDALNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNK----
General information:
TITO was launched using:
RESULT:
Template:
3HSG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106660 for 1137 contacts (-93.8/contact) +
2D Compatibility (PS) -16193 + (NN) -7860 + (LL) 832
1D Compatibility (HY) -16000 + (ID) 3950
Total energy: -149831.0 ( -131.78 by residue)
QMean score : 0.646
(partial model without unconserved sides chains):
PDB file :
Tito_3HSG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HSG-query.scw
PDB file :
Tito_Scwrl_3HSG.pdb
: