Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTVKTVRELRAAVARARSEGKRIGFVPTMGNLHAGHAALVKKAGERADFVVVSIFVNPLQFGPSEDLDTYPRTLAADQERLLEAGCHLLFTPTVEEMYPDGMDGQTRIHVPGVSEGLCGASRPGHFEGVATVVSKLLNMVQPDLALFGEKDFQQLAVIRKLVRDLNLPVQIFGEPTVRAADGLALSSRNGYLDEQQRAAAPAIYRTLRQLGERIRAGAEDFPALLADARQALEQAGLRPDYLEIREPISLRPGVPGDRQLVILAAAYLGSTRLIDNLSVHLD
3Q10 Chain:D ((4-281))
MLIIETLPLLRQQIRRWRQEGKRIALVPTMGNLHEGHMTLVDEAKTRADVVVVTIFVNPLQFERPDDLAHYPRTLQEDCEKLTRHGADLVFAPAAADIYPAGLEKQTYVDVPALSTILEGASRPGHFRGVSTIVSKLFNLIQPDVACFGEKDYQQLALIRKMVADMGYDINIVGVP--------------------------------------------------------------TPDELFIR---------------VILMAA----ARLIDNQ-----
General information:
TITO was launched using:
RESULT:
Template:
3Q10.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131913 for 1532 contacts (-86.1/contact) +
2D Compatibility (PS) -22163 + (NN) -17113 + (LL) 5536
1D Compatibility (HY) -23200 + (ID) 5650
Total energy: -194503.0 ( -126.96 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_3Q10.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q10-query.scw
PDB file :
Tito_Scwrl_3Q10.pdb
: