Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVLIVDDEPLARERLARLVGQLDGYRVLEPSASNGEEALTLIDSLKPDIVLLDIRMPGLDGLQVAARLCEREAPPAVIFCTAHDEFAL--EAFQVSAVGYLVKPVRSEDLAEALKKASRPNRVQLAALTKPPASGGSGPRSHISARTRKGIELIPLEEVIFFIADHKYVTLRHAQGEVLLDEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGHFQLYLKGLDGDALTVSRRHVAGVRRLMHQL
1PEY Chain:C ((6-117))
--ILIVDDQSGIRILLNEVFNK-EGYQTFQ--AANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKK-------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1PEY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99524 for 834 contacts (-119.3/contact) +
2D Compatibility (PS) -12289 + (NN) -10615 + (LL) 10060
1D Compatibility (HY) -10800 + (ID) 1850
Total energy: -125018.0 ( -149.90 by residue)
QMean score : 0.754
(partial model without unconserved sides chains):
PDB file :
Tito_1PEY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PEY-query.scw
PDB file :
Tito_Scwrl_1PEY.pdb
: