Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATPAYMSITGTKQGLITAGAFTEDSVGNTYQEGHEDQVMVQGFNHEVIIPRDPQSGQPTGQRVHK--------------PVVITKVFDKASPLLLAALTSGERLTKVE--------IQWY----------------RTSAA----------------------GTQEHYYTTVLEDAIIVDIKDYMHNCQDP-------GNAHFTHLEDVHFTYRKITWTHEVSGTSGSDDWRSPVAG-------------- |
| 4PWO Chain:A ((1-250)) | --TQAEKTATDLPPGFSGKAGSVNATPGTKGLDG-PTPLADGSFDATIFGPAKELKSADDILNVHRRNAKDPFAVGAVDAPLVITEFSDFECPFCARWSNQTEPTLMEEYVSKGLVRIEWNDLPVNGEHALAAAKAGRAAAAQGKFDEFRKALFEASRNVSGHPNNTLKDFERFARNAGVKDMERFSREAQDSTYDEVLAKAADYAHGLGVSGTPAFVVGTQYISGAQPTEEFIKVIESELKKSPTFSTPSSH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PWO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4029 for 1004 contacts (-4.0/contact) +
2D Compatibility (PS) -17836 + (NN) -5056 + (LL) 396
1D Compatibility (HY) 400 + (ID) 1700
Total energy: -27825.0 ( -27.71 by residue)
QMean score : 0.063
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