Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRMRFSGISGCLSAAVLALGVGGAPVVQADALGDSLEQAHIRKATFAA-PAWEGYTNAD----GSGLYWDLLKQVYAPY-------GLDVKFINMPWNRANKLMTAGS---MV-DGVPGEIPGVE-GKLYAQLPIDIEYHGVMHAAKTPFSGRASLTGKRVGWRHSYNLIPAEQR-------DFTLVECVRPERCTEQVQNGELDFFLDEPDELEKQRSEAHLPADAYPI--AQLPPGKESFMTFADSASGRLLREVYDARVRQMAASGELRALYQRWNSEVPGAVQALSAQ |
| 2VHA Chain:A ((10-252)) | ----------------------------------LDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNV--ERQKQAAFSD-TIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAK-KPDNWDIVGKPQSQ-EAYGCMLRKDD--PQFKKLMDDTIAQVQTSGEAEKWFDKWFKNPIP-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2VHA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -41979 for 1721 contacts (-24.4/contact) +
2D Compatibility (PS) -23648 + (NN) -5172 + (LL) 3112
1D Compatibility (HY) -7200 + (ID) 1450
Total energy: -76337.0 ( -44.36 by residue)
QMean score : 0.458
|
|
|