Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------------MAELTTLARPY-AKAAFEYAQAHQQLADWSAALGVLAAVSQDDTVRQLLKEPQLTSSAKAQSLIDVCGDKLNAPAQNFVRTVAE----------NKRLELLPTIAEMYEQLKAEQEKSVEVEVTSA--FTLSKEQ---QDKLAKALSARLSREVRLHASED---------ASLIGGVIIRAGDLVIDGSVRGKLAKLAEALKS------
3OTD Chain:A ((3-269))KSKFEYVRDFEADDTCLAHCWVVVRLDGRNFHRFAEKHNFAKPNDSRALQLMTKCAQTVMEELE--DIVIAYGQSDEYSFVFKRKTNWFKRRASKFMTHVASQFASSYVFYWRDYFEDQPLLYPPGFDGRVVVYPSNQTLKDYLSWRQADCHINNLYNTVFWALIQQSGLTPVQAQGRLQGTLAADKNEILFSEFNINYNNELPMYRKGTVLIWQTKPVPLHCDIIGDAFWKEHPEILDEDS


General information:
TITO was launched using:
RESULT:

Template: 3OTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4341 for 1150 contacts (-3.8/contact) +
2D Compatibility (PS) -19270 + (NN) -8740 + (LL) 320
1D Compatibility (HY) -5600 + (ID) 1050
Total energy: -38681.0 ( -33.64 by residue)
QMean score : 0.333

(partial model without unconserved sides chains):
PDB file : Tito_3OTD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OTD-query.scw
PDB file : Tito_Scwrl_3OTD.pdb: